Bartosz Bartmanski

Bartosz Bartmanski

Senior Staff Scientist, EMBL
Quantitative scientist
Software, data and models

Publications

Detection of pharmacokinetic (PK) model misspecification: methodology for identifying structural misspecification in population PK models

Published in Population Approach Group Europe (PAGE) 2026, Dubrovnik (poster), 2026

Poster presented at the 34th meeting of the Population Approach Group Europe (PAGE 2026), Dubrovnik, Croatia, 2–5 June 2026.

Recommended citation: Bartmanski, B. J. and Bobadilla, A. V. P. (2026). "Detection of pharmacokinetic (PK) model misspecification: methodology for identifying structural misspecification in population PK models." Population Approach Group Europe (PAGE) 2026, Dubrovnik, Croatia. Poster presentation.

GEMsembler: consensus model assembly and structural comparison of genome-scale metabolic models across tools improve functional performance

Published in mSystems, 2025

Read the paper · Software

Recommended citation: Matveishina, E. K., Bartmanski, B. J., Benito-Vaquerizo, S., and Zimmermann-Kogadeeva, M. (2025). "GEMsembler: consensus model assembly and structural comparison of genome-scale metabolic models across tools improve functional performance." mSystems, 10(10), e00574-25. https://doi.org/10.1128/msystems.00574-25

Multi-omics profiling of cross-resistance between ceftazidime-avibactam and meropenem identifies common and strain-specific mechanisms in Pseudomonas aeruginosa clinical isolates

Published in mBio, 2025

Read the paper · Preprint (bioRxiv) · Code and data

Recommended citation: Bartmanski, B. J., Bösch, A., Schmitt, S., Ireddy, N. R., Ren, Q., Findlay, J., Egli, A., Zimmermann-Kogadeeva, M., and Babouee Flury, B. (2025). "Multi-omics profiling of cross-resistance between ceftazidime-avibactam and meropenem identifies common and strain-specific mechanisms in Pseudomonas aeruginosa clinical isolates." mBio, 16(7), e03896-24. https://doi.org/10.1128/mbio.03896-24

Effects of different discretisations of the Laplacian upon stochastic simulations of reaction–diffusion systems on both static and growing domains

Published in Journal of Computational and Applied Mathematics, 2021

Read the paper · Preprint (arXiv)

Recommended citation: Bartmanski, B. J. and Baker, R. E. (2021). "Effects of different discretisations of the Laplacian upon stochastic simulations of reaction–diffusion systems on both static and growing domains." Journal of Computational and Applied Mathematics, 395, 113570. https://doi.org/10.1016/j.cam.2021.113570